Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015893792.1_cds_XP_016447443.1_42203
CDS Infomation

[gene=LOC107772447] [db_xref=GeneID:107772447] [protein=protein decapping 5-like isoform X2] [protein_id=XP_016447443.1] [location=complement(join(165182..165325,165420..165530,165684..165875,169452..170312,170483..170554,172081..172181,173040))] [gbkey=CDS]
Sequence

ATGAGATCATACGGAACTGAGGGGCGTAAGAAAGACAGTCCACAGGTTCCTCCAAATGAT
AGAGTTTATGACTACATTTTGTTTCGTGGGAGTGACATTAAGGATTTGCAAGTAAAGTCC
TCTCCACCTCCTCAAGTGGAAGAATCATTGGATAACGATCCTGCAATTATTCAGTCACGC
TGTGCTGGAGTCCATCCAAGCTCTTCAAAACCAGTTTCGCTGAATGGTGGATCTTTGACA
GAATATGGCACTTACAAGGGACCTGCTTCCTTGAATAGTGTGCCAGCTTCACATCAATCA
GTAAACCATTTTGAACAAGGCAGTTCTGAGGCAACTCAATCCAACTTTGGTTCTTATACA
ACGCCAACTTACGGACAAAGACACAGTGAACCTGCAAGCAGTCACCGTGCTCCACAGCAT
TCTCTTCTACCTGCTGTTTCACATCCAATGATGCAGGATTTGCTGCAGGCTTATCCACTC
CAGGGTCCTGAACCTTTCACATCAACTGTTCTATCAAAATCCGTAGCTTCAGTGCCTTTG
GTTAACACTGCAAATTCTTTATCTTTAACTAGTAGACATAGTCTTGCACCCCAACAACTT
CCCATGGCTCCTAGTACTAACATTATATCTCCCTTATTAAATGTATCATCTTCAATGTCT
TCTTATGCGTATGCTCCTTCTGCATTTGCCCAATCTGGTCAAAATGTGGGTTCTTATGCG
TATGCTCCTTCGGCATTTCCCCAATCTGGTCAAAGTGTGGGCAACTCTGGTGCTCCAATC
CTTGCTAGAATAGGTTCTAACACTTCACCCTTCTATCCTGTATCCCCAGTTGTAGATTCC
TCATCAGGTGTCTTTCCACAGCAACCCCCTAGACTGCTAACTCCGGATCAGTTATCTCTA
CCCAGATTATCTGGGCAATTATATTCAGATCAGAAGGACCTTGGTGCTCTGAGCTCAGAA
CCTTTGAATCCCTCATCACTTGCTACTCCAGCAGTCCAAGCGCCATTGTTGCCATTGCCA
CCTGCTGCGAAGAAGTTGCAATCATCTTCTGAGTTTACTGAAGAATTCGATTTTGTTGCA
ATGAATGGGAAGTTTAATAAGGATGAAGTATGGGGTTATCTTGGAAAAGCAAAACAAACA
GCTAAAACAATGGACAGTGAGGACATTGGCAATGAGAACAAGGGGAATGAAGACGGTTAT
GGCTTGGATTGTAATGCTGATCCCAAACCTGCCTATAATAAGGATGACTTCTTTGATAAT
ATATCTCGTAACACAGTTGCTCGTGGAGGTAGGAATGGGCAGAATCGTTTTTCTCAGAGG
ATGAGGCAGGATACTGAGACTTTTGGTAACCATCAACAGAGGCCTTATCCTGGATATGGT
GGCTATGGGCCTGGACATGGTGGGCACCGTGGTGGCTATGGTAGGGGAAGGGGGTATAAT
AACTATGGCAGTAGGGGCCGTGGAGGGTACATGAGGATGTAG

Peptide Sequence

PEP ID

XP_016447443.1
PEP Infomation

PREDICTED: protein decapping 5-like isoform X2 [Nicotiana tabacum]
Sequence

MRSYGTEGRKKDSPQVPPNDRVYDYILFRGSDIKDLQVKSSPPPQVEESLDNDPAIIQSR
CAGVHPSSSKPVSLNGGSLTEYGTYKGPASLNSVPASHQSVNHFEQGSSEATQSNFGSYT
TPTYGQRHSEPASSHRAPQHSLLPAVSHPMMQDLLQAYPLQGPEPFTSTVLSKSVASVPL
VNTANSLSLTSRHSLAPQQLPMAPSTNIISPLLNVSSSMSSYAYAPSAFAQSGQNVGSYA
YAPSAFPQSGQSVGNSGAPILARIGSNTSPFYPVSPVVDSSSGVFPQQPPRLLTPDQLSL
PRLSGQLYSDQKDLGALSSEPLNPSSLATPAVQAPLLPLPPAAKKLQSSSEFTEEFDFVA
MNGKFNKDEVWGYLGKAKQTAKTMDSEDIGNENKGNEDGYGLDCNADPKPAYNKDDFFDN
ISRNTVARGGRNGQNRFSQRMRQDTETFGNHQQRPYPGYGGYGPGHGGHRGGYGRGRGYN
NYGSRGRGGYMRM

Transcript Sequence

Gene sequence data has not been registered.